DNMAD Bioinformatics Unit   -   CNIO

 DNMAD
 
 


  Array files selection  
To enter individual uncompressed files of arrays, enter the number of arrays you want to normalize in the
following textbox:  
Then click on the following button:     


Alternatively, you can select a compressed file of arrays:  
         

red(Cy5)/green(Cy3) ratio or green(Cy3)/red(Cy5) ratio
  Enter layout information     Choose your normalization options  
Rows Columns
     Main grid: X
     Sub-grid:           X
Use negative flags
     Return negative flagged points as NA
     Use positive flags
Use background correction
     Use background subtraction
     Use 'half'
Use global loess

        Help  


Click here to start a new normalization process. Please read the deprecation warning in the help before proceeding. Help  Send comments to the webmaster. Last rev. July 29th, 2005. (caton)

Asterias, a parallelized, web-based suite for the analysis of genomic data, includes applications for differential gene expression, normalization, survival analysis, aCGH, etc. See further details in the paper in NAR